In Vitro and In Silico Analysis of Osteoclastogenesis in Response to Inhibition of De-phosphorylation of EIF2alpha by Salubrinal and Guanabenz

dc.contributor.advisorYokota, Hiroki, 1955-
dc.contributor.authorTanjung, Nancy Giovanni
dc.contributor.otherJi, Julie
dc.contributor.otherNa, Sungsoo
dc.contributor.otherBerbari, Edward J.
dc.date.accessioned2014-10-03T15:04:59Z
dc.date.available2014-10-03T15:04:59Z
dc.date.issued2013
dc.degree.date2013en_US
dc.degree.disciplineBiomedical Engineering
dc.degree.grantorPurdue Universityen_US
dc.degree.levelM.S.en_US
dc.descriptionIndiana University-Purdue University Indianapolis (IUPUI)en_US
dc.description.abstractAn excess of bone resorption over bone formation leads to osteoporosis, resulting in a reduction of bone mass and an increase in the risk of bone fracture. Anabolic and anti-resorptive drugs are currently available for treatment, however, none of these drugs are able to both promote osteoblastogenesis and reduce osteoclastogenesis. This thesis focused on the role of eukaryotic translation initiation factor 2 alpha (eIF2alpha), which regulates efficiency of translational initiation. The elevation of phosphorylated eIF2alpha was reported to stimulate osteoblastogenesis, but its effects on osteoclastogenesis have not been well understood. Using synthetic chemical agents such as salubrinal and guanabenz that are known to inhibit the de-phosphorylation of eIF2alpha, the role of phosphorylation of eIF2alpha in osteoclastogenesis was investigated in this thesis. The questions addressed herein were: Does the elevation of phosphorylated eIF2alpha (p-eIF2alpha) by salubrinal and guanabenz alter osteoclastogenesis? If so, what regulatory mechanism mediates the process? It was hypothesized that p-eIF2alpha could attenuate the development of osteoclast by regulating the transcription factor(s) amd microRNA(s) involved in osteoclastogenesis. To test this hypothesis, we conducted in vitro and in silico analysis of the responses of RAW 264.7 pre-osteoclast cells to salubrinal and guanabenz. First, the in vitro results revealed that the elevated level of phosphorylated eIF2alpha inhibited the proliferation, differentiation, and maturation of RAW264.7 cells and downregulated the expression of NFATc1, a master transcription factor of osteoclastogenesis. Silencing eIF2alpha by RNA interference suppressed the downregulation of NFATc1, suggesting the involvement of eIF2alpha in regulation of NFATc1. Second, the in silico results using genome-wide expression data and custom-made Matlab programs predicted a set of stimulatory and inhibitory regulator genes as well as microRNAs, which were potentially involved in the regulation of NFATc1. RNA interference experiments indicated that the genes such as Zfyve21 and Ddit4 were primary candidates as an inhibitor of NFATc1. In summary, the results showed that the elevation of p-eIF2alpha by salubrinal and guanabenz leads to attenuation of osteoclastogenesis through the downregulation of NFATc1. The regulatory mechanism is mediated by eIF2alpha signaling, but other signaling pathways are likely to be involved. Together with the previous data showing the stimulatory role of p-eIF2alpha in osteoblastogenesis, the results herein suggest that eIF2alpha-mediated signaling could provide a novel therapeutic target for treatment of osteoporosis by promoting bone formation and reducing bone resorption.en_US
dc.identifier.urihttps://hdl.handle.net/1805/5189
dc.identifier.urihttp://dx.doi.org/10.7912/C2/1347
dc.language.isoen_USen_US
dc.subject.lcshBone resorption -- Research -- Methodology -- Analysisen_US
dc.subject.lcshBone regeneration -- Research -- Methodologyen_US
dc.subject.lcshBone remodeling -- Research -- Methodology -- Evaluationen_US
dc.subject.lcshBones -- Growthen_US
dc.subject.lcshOsteoclasts -- Ultrastructureen_US
dc.subject.lcshFracturesen_US
dc.subject.lcshPhosphorylationen_US
dc.subject.lcshGenetic regulationen_US
dc.subject.lcshGenetic transcription -- Regulationen_US
dc.subject.lcshOsteoporosis -- Preventionen_US
dc.subject.lcshEukaryotic cells -- Geneticsen_US
dc.subject.lcshSmall interfering RNA -- Researchen_US
dc.subject.lcshSignal processing -- Digital techniques -- Methodologyen_US
dc.subject.lcshOsteoporosis -- Alternative treatmenten_US
dc.subject.lcshBiomedical engineering -- Researchen_US
dc.subject.lcshCellular signal transduction -- Researchen_US
dc.titleIn Vitro and In Silico Analysis of Osteoclastogenesis in Response to Inhibition of De-phosphorylation of EIF2alpha by Salubrinal and Guanabenzen_US
dc.typeThesis
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